Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931349.1_cds_XP_016478169.1_69835
CDS Infomation

[gene=LOC107799559] [db_xref=GeneID:107799559] [protein=nematode resistance protein-like HSPRO2] [protein_id=XP_016478169.1] [location=complement(11541..12980)] [gbkey=CDS]
Sequence

ATGGTTGATTACGATAGAAAGACAACAAAGATGATATCCTCTGATATGCCTAGCAAATCG
CCGAAGATTTCAAATAAGCTTCAAATTTCAATACCAGCTGCGGCACCTATTCGGTTGACG
GAGCTGTCGGCGGCGTCTGATTCAGCTTGTTCAGCTTACGAGCACTACCTAAGGCTACCG
GAGCTGAAGAAGATATGGAGTTGTGTAGAATTTCCGAGTTGGAAGAATGAATCGTTGCTC
AAACCGGCTTTGCAAGGTTTGGAAACGACTTTCCGGTTCATTTCTATTGTGTTGTCTGAT
CCTAGACCGTATATGAACCGGAGAGAATGGAAGCGGAGGCTTGAATCATTGGCAATGGAT
CAGATTGAAATCATAGCTATGTTGTGCGAAGATGAAGAAGAGGATTCGGAGACACGTGGC
ACGGCTCCCGTCGGTGACCTCACGTCGTCAACTAGTGTATTGGCTCGTCAGAATAGTTCG
GCGGAAGTGTGGAAGCTTTCCGATGAGACGACGGTGGTTAGCCAAACGAGTGAAGCCAGC
TTGTTGCCTCGTCTCGCGGCTTGGCAGAAGTCCGAAGACATAGCGCAGAAGATTTTGAAT
TCCATTGAATGCGAAATGAGGAGATGTCCATACACACTCGGATTAGGCGAGCCGAATCTG
AGCGGCAAGCCAAGCCTTGAATATGACGCAGTAGTCAAGCCATCGGAGCTTCACGCTCTG
AAGAAAAGCCCTTCCGATCGCATGAATTTGGAAAATTTCGAAAACCGAACGCTGTACACG
ACGCACCAGATCCTCGAGACATGGATCTACGCGTCAAAAATGCTTCTAAAGAGAATCGCC
GAGAGAATCGATCGCAAGGACTTGGAAAAAGCCGTTAACGACTGCTGGTTACTGGAGAAA
ACGTGGAAACTTCTAACAGAAATCGAAGACCTTCACTTGCTAATGGATCCGGACGATTTT
CTGCGCCTAAAAAACCAATTATCCATTAAAGCAACTACCGAATCGGAGCTATTTTGCTTC
CGATCCAAAGGACTCGTAGAAATTACCAAACAATCCAAGGATCTAAAGCACAAAGTGCCG
AACATTCTAGACGTAGAGGTAGATCCCCAGGGTGGGCCGAGAATTCAAGAGGCAGCCATG
GAGTTGTTCAGGAAAAAGGAAAGCTTCGAGAAGATTCACTTACTTCAAGCTTTACAAGCA
ATTGAAATGGCAGTGAAGAGGTTCTACTATTCGTATAAGCAGTTGTTGGTAATTGTTATG
GGGAGTTTAGAAGCTAAAGGCAACACAACATTTATGGCCGTTGATACAAGCGATGCATTG
GCTCAGATCTTCCTTGAGCCAACATATTTTCCGAGTCTGGATGCTGCAAAAACTTTTCTG
GGAGAACAATGGAGTCATGAGCATGGGAAGTATAGTCCAGAGAGAAGTAACAAGGCCTAA

Peptide Sequence

PEP ID

XP_016478169.1
PEP Infomation

PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana tabacum]
Sequence

MVDYDRKTTKMISSDMPSKSPKISNKLQISIPAAAPIRLTELSAASDSACSAYEHYLRLP
ELKKIWSCVEFPSWKNESLLKPALQGLETTFRFISIVLSDPRPYMNRREWKRRLESLAMD
QIEIIAMLCEDEEEDSETRGTAPVGDLTSSTSVLARQNSSAEVWKLSDETTVVSQTSEAS
LLPRLAAWQKSEDIAQKILNSIECEMRRCPYTLGLGEPNLSGKPSLEYDAVVKPSELHAL
KKSPSDRMNLENFENRTLYTTHQILETWIYASKMLLKRIAERIDRKDLEKAVNDCWLLEK
TWKLLTEIEDLHLLMDPDDFLRLKNQLSIKATTESELFCFRSKGLVEITKQSKDLKHKVP
NILDVEVDPQGGPRIQEAAMELFRKKESFEKIHLLQALQAIEMAVKRFYYSYKQLLVIVM
GSLEAKGNTTFMAVDTSDALAQIFLEPTYFPSLDAAKTFLGEQWSHEHGKYSPERSNKA

Transcript Sequence

Gene sequence data has not been registered.